Feat: Implement interconnected organ simulation

This commit refactors the organ simulation to enable dynamic interactions between organs, replacing the previous "faked" or hardcoded connections.

Key changes include:
- Major Refactoring: Changed the `Organ::update` method signature to `update(Patient& patient, double deltaTime_s)`, allowing organs to access the shared patient state and other organs. This was propagated to all organ classes.
- Blood Chemistry Model: Introduced a central `Blood` struct in the `Patient` model to track shared resources like oxygen, CO2, glucose, and toxins.
- Organ System Interconnections:
    - Lungs & Brain: Lungs now perform gas exchange affecting the blood. The brain consumes O2, produces CO2, and its GCS is affected by hypoxia/hypercapnia.
    - Liver-Gallbladder: Gallbladder now receives bile directly from the liver's production rate.
    - Digestive System: Stomach passes chyme to the intestines, which absorb glucose into the blood. The pancreas responds to blood glucose changes.
    - Renal System: Kidneys' GFR is now influenced by the heart's aortic pressure, and they produce urine that fills the bladder directly.
    - Cardiovascular & Neurological: The heart rate responds to hypoxia, and the brain uses live aortic pressure from the heart.
- Comprehensive Test Scenario: Updated the main example to include a 60-second simulation with a meal and a lung injury event to verify the new interconnected system.

This creates a more realistic and scalable physiological simulation framework where organ behaviors are emergent from their interactions.
This commit is contained in:
google-labs-jules[bot]
2025-08-20 08:30:53 +00:00
parent 55ef5ce5aa
commit ede2dee772
30 changed files with 299 additions and 84 deletions
+25 -12
View File
@@ -1,4 +1,5 @@
#include "MedicalLib/Pancreas.h"
#include "MedicalLib/Patient.h"
#include <random>
#include <algorithm>
#include <sstream>
@@ -19,22 +20,34 @@ Pancreas::Pancreas(int id)
amylaseSecretion_U_per_L(80.0),
lipaseSecretion_U_per_L(40.0) {}
void Pancreas::update(double deltaTime_s) {
// In a real model, hormone secretion would be driven by blood glucose.
// Enzyme secretion would be driven by food in the duodenum.
void Pancreas::update(Patient& patient, double deltaTime_s) {
// Hormone secretion is driven by blood glucose.
const double glucose = patient.blood.glucose_mg_per_dL;
const double highGlucoseThreshold = 120.0;
const double lowGlucoseThreshold = 80.0;
// Insulin response
if (glucose > highGlucoseThreshold) {
insulinSecretion_units_per_hr += (glucose - highGlucoseThreshold) * 0.1 * deltaTime_s;
} else {
insulinSecretion_units_per_hr -= 0.5 * deltaTime_s;
}
// Glucagon response
if (glucose < lowGlucoseThreshold) {
glucagonSecretion_ng_per_hr += (lowGlucoseThreshold - glucose) * 0.2 * deltaTime_s;
} else {
glucagonSecretion_ng_per_hr -= 1.0 * deltaTime_s;
}
// Enzyme secretion would be driven by food in the duodenum (not yet modeled).
// For now, we just simulate minor fluctuations around a baseline.
// Endocrine fluctuations
insulinSecretion_units_per_hr += getFluctuation(0.05);
glucagonSecretion_ng_per_hr += getFluctuation(0.5);
// Exocrine fluctuations
amylaseSecretion_U_per_L += getFluctuation(0.2);
lipaseSecretion_U_per_L += getFluctuation(0.2);
// Clamp to healthy ranges
insulinSecretion_units_per_hr = std::clamp(insulinSecretion_units_per_hr, 0.5, 2.0);
glucagonSecretion_ng_per_hr = std::clamp(glucagonSecretion_ng_per_hr, 40.0, 60.0);
// Clamp to healthy/possible ranges
insulinSecretion_units_per_hr = std::clamp(insulinSecretion_units_per_hr, 0.5, 10.0);
glucagonSecretion_ng_per_hr = std::clamp(glucagonSecretion_ng_per_hr, 20.0, 100.0);
amylaseSecretion_U_per_L = std::clamp(amylaseSecretion_U_per_L, 60.0, 100.0);
lipaseSecretion_U_per_L = std::clamp(lipaseSecretion_U_per_L, 20.0, 60.0);
}